BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F07LP1|AL430088
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1899 0.0
3x_Contig1408 107 4e-23
>3x_Contig1807
Length = 66587
Score = 1899 bits (958), Expect = 0.0
Identities = 965/966 (99%), Gaps = 1/966 (0%)
Strand = Plus / Minus
Query: 1 gatcaacggtaccatcggtacctgcctgacagatctgttttcaactcctgcactaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4562 gatcaacggtaccatcggtacctgcctgacagatctgttttcaactcctgcactaggaag 4503
Query: 61 ctcatcattaggctttaatccggccgaaggg-tgaatgaccccttttcgctgggtttgtt 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4502 ctcatcattaggctttaatccggccgaaggggtgaatgaccccttttcgctgggtttgtt 4443
Query: 120 tgactcgtcatatggcaaaaatctccatctctttccatccatatgccagtgctgactttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4442 tgactcgtcatatggcaaaaatctccatctctttccatccatatgccagtgctgactttg 4383
Query: 180 ttcaagaacttagacaaggtggagaacattctaaaggaaaggtataaaatcttgaggcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4382 ttcaagaacttagacaaggtggagaacattctaaaggaaaggtataaaatcttgaggcct 4323
Query: 240 ggtagttcttctgaagaagaaatcttaaaaaaattctatctactgggagatcaattgact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4322 ggtagttcttctgaagaagaaatcttaaaaaaattctatctactgggagatcaattgact 4263
Query: 300 gaagccgatttgagattatacactaccatgatcagattcgatcctgtatacgctcagcac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4262 gaagccgatttgagattatacactaccatgatcagattcgatcctgtatacgctcagcac 4203
Query: 360 ttcaaagccaacttgaacactgtccgtggcgggtatccttacatccatttgtggctcaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4202 ttcaaagccaacttgaacactgtccgtggcgggtatccttacatccatttgtggctcaga 4143
Query: 420 aacttgtactggaacggtaaaacttactaacttcaaccatatcaaatggcactataccag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 aacttgtactggaacggtaaaacttactaacttcaaccatatcaaatggcactataccag 4083
Query: 480 atctcatccaagaatcaacccgttggcaatcacgccattgggtccttctcctaacatttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4082 atctcatccaagaatcaacccgttggcaatcacgccattgggtccttctcctaacatttt 4023
Query: 540 gccattgtaaagaagagagatggccacagtattacagggctacccacatatttcaatcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4022 gccattgtaaagaagagagatggccacagtattacagggctacccacatatttcaatcat 3963
Query: 600 tagtggttggattatacattcattagtctataataaatgatcaataaagatttgtcctca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 tagtggttggattatacattcattagtctataataaatgatcaataaagatttgtcctca 3903
Query: 660 tccatattaagatgagaaaagatacgctaactcgagtattttaaaatatcttcgacaaac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 tccatattaagatgagaaaagatacgctaactcgagtattttaaaatatcttcgacaaac 3843
Query: 720 tccatactacaacttgtttctaatttattcacatcttcccctctttcggtacgattagcc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 tccatactacaacttgtttctaatttattcacatcttcccctctttcggtacgattagcc 3783
Query: 780 atcaccgattgtttgatcgtcatactaattactaaaaggtagtgatattgcagataagtg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 atcaccgattgtttgatcgtcatactaattactaaaaggtagtgatattgcagataagtg 3723
Query: 840 gtaacactaagcttaccaatatggcacaggtaattagtatgcaattagcaacttctacca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 gtaacactaagcttaccaatatggcacaggtaattagtatgcaattagcaacttctacca 3663
Query: 900 acttactaatggattcctgctcaattccttactgcgagtggtctaggtgatggactttta 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 acttactaatggattcctgctcaattccttactgcgagtggtctaggtgatggactttta 3603
Query: 960 tacgga 965
||||||
Sbjct: 3602 tacgga 3597
>3x_Contig1408
Length = 6607
Score = 107 bits (54), Expect = 4e-23
Identities = 126/150 (84%)
Strand = Plus / Minus
Query: 285 ggagatcaattgactgaagccgatttgagattatacactaccatgatcagattcgatcct 344
||||||||||| ||||| || || ||||||||||| ||||||| | ||||| || |||
Sbjct: 2518 ggagatcaattaactgaggctgacttgagattatatcctaccattgtaagatttgaccct 2459
Query: 345 gtatacgctcagcacttcaaagccaacttgaacactgtccgtggcgggtatccttacatc 404
||||||| |||||| |||||| |||| ||||||||| | || ||||| |||||||||
Sbjct: 2458 gtatacgttcagcatttcaaaaccaatttgaacactattcgctcggggtacccttacatc 2399
Query: 405 catttgtggctcagaaacttgtactggaac 434
|||||||||||||||||||| || ||||||
Sbjct: 2398 catttgtggctcagaaacttatattggaac 2369
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6764
Number of Sequences: 1807
Number of extensions: 6764
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)